PhD Candidate @ Univeristy of Cambridge & Gates Cambridge Scholar
working on Epigenetics | Bioinformatics | Transposons | Metagenomics | Algae | Chlamydomonas
ORCID iD
GitHub Portfolio
New repositories
MetaPLMA - Metabolite Peak List Merge & Annotation Tool: A platform independent R tool to merge and annotate metabolite-peak data from GC/MS runs.
PuntSeq - Chasing the microbial diversity of Cambridge’s freshwater
Repository of assembled reference genomes of the green model alga Chlamydomonas reinhardtii including files optimised for visualisation in IGV
Associated Publications
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Urban L, Holzer A*, Baronas JJ, Hall M, Braeuninger-Weimer P, Scherm MJ, Kunz DJ, Perera SN, Martin-Herranz DE, Tipper ET, Salter SJ, Stammnitz MR (2020) Freshwater monitoring by nanopore sequencing. *BioRxiv preprint 1-38. doi: 10.1101/2020.02.06.936302
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Bunbury F, Helliwell KH, Mehrshahi P, Davey MP, Salmon D, Holzer A, Smirnoff N, Smith AG (2020) Physiological and molecular responses of a newly evolved auxotroph of Chlamydomonas to B12 deprivation. Plant Physiology 1-20. doi: 10.1101/836635
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Holzer A (2019). The Chlamydomonas reference genomes for visualisation in IGV (Version v1.0). Zenodo. doi: 10.5281/zenodo.3732212